Software and Online Materials Developed

  • jViz.RNA - A Java tool for RNA secondary structure visualization including pseudoknots, available from . jViz.Rna is used by hundreds of research labs in the US, Canada, and Europe. We receive about 10 inquiries per month and user responses have been very favorable. Users include Biochemists, Microbiologists, and Medical Researchers. Images of jViz.Rna are found in many RNA related technical publications including the cover pages of the IEEE/ACM Transactions of Computational Biology and Bioinformatics and the book Computational Intelligence in Bioinformatics (Wiley)
  • ITEC 306: Operating Systems. Online course including animations and learning objects, 2001
  • QDOOCS, A C++ Class Library for Solving Binary Constraint Satisfaction Problems, 1996